![]() ![]() ![]() Our results provide insights into the footprint of crop improvement on the plant’s capacity of shaping rhizosphere microbes. This allows us to identify three primary candidate genes, including a Nucleotide-Binding-Leucine-Rich-Repeat ( NLR) gene in a region of structural variation of the barley genome. We subject soil-grown sibling lines harbouring contrasting alleles at QRMC-3HS and hosting contrasting microbiotas to comparative root RNA-seq profiling. One of those, designated the QRMC-3HS, emerges as a major determinant of microbiota composition. ![]() We identify a small number of loci with a major effect on the composition of rhizosphere communities. Here, we use metagenomics information as an external quantitative phenotype to map the host genetic determinants of the rhizosphere microbiota in wild and domesticated genotypes of barley, the fourth most cultivated cereal globally. A prerequisite to exploiting soil microbes for sustainable crop production is the identification of the plant genes shaping microbiota composition in the rhizosphere, the interface between roots and soil. ![]()
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